Examine genome analysis using public biological databases in both UNIX and Windows environments. In this course, you will gain hands-on experience in commercial bioinformatics by analyzing and annotating a full genome through applying and integrating the information, methodology and tools. Using the Perl programming language in a UNIX environment, you will learn to query databases, parse the resulting data and generate relevant reports. Databases and software covered include NCBI, BLAST/PSI-BLAST, CLUSTALW, PFAM, KEGG, RefSeq and OMIM.
Note: Prerequisites: Completion of "Bioinformatics", "Perl Programming" and "Introduction to Molecular Biology" or equivalent experience/knowledge.
Course Number: BIOL-40131
Credit: 3.00 units
Dates: 09/23/13 - 11/25/13
Section ID: 098099
Time: M, 6:30 p.m. - 9:30 p.m. No mtg. 11/11/13 (9 mtgs.)
Location: Room 208, UCSD Extension University City Ctr, 6256 Greenwich Dr., San Diego, CA 92122
Class Type: In-class—traditional classroom instruction
Instructor: Steve J Stelman, TimeLogic Manager, Active Motif
Textbooks: No information available at this time.
Section Policies: No refunds after: 09/30/13.